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=The Clinical Informatics Wiki -- Clinfowiki=
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'''Welcome to the OHSU Clinfowiki'''
  
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The Clinical Informatics Wiki is an implementation of a [http://en.wikipedia.org/wiki/Wiki wiki] devoted to topics in clinical informatics. To begin a new article, or edit an existing article, you must first create an account and login to the ClinfoWiki.
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The OHSU Clinical Informatics Wiki (aka ClinfoWiki) is the implementation of a [http://en.wikipedia.org/wiki/Wiki wiki] website devoted to topics in [[Biomedical Informatics]].  
  
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Please see [http://meta.wikipedia.org/wiki/MediaWiki_i18n documentation on customizing the interface]
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The Department of Medical Informatics & Clinical Epidemiology (DMICE) is one of 27 academic departments in the School of Medicine at Oregon Health & Science University (OHSU). The mission of DMICE is to provide leadership, discovery and dissemination of knowledge in clinical informatics, clinical epidemiology, and bioinformatics / computation biology. This mission is fulfilled through programs of research, education, and service. DMICE programs are recognized internationally for their accomplishment and innovation. The OHSU Biomedical Informatics program is one of the largest of its kind in the world.  
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and the [http://meta.wikipedia.org/wiki/MediaWiki_User's_Guide User's Guide] for usage and configuration help.
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You can test your edits as much as you want in the [http://en.wikipedia.org/wiki/Wikipedia:Sandbox Sandbox].
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Clinfowiki is edited by [https://www.ohsu.edu/people/vishnu-mohan/2BD88C7AE00A4A21861DFB0964974984 Vishnu Mohan, M.D., M.B.I.], and was created in 2005 by [https://en.wikipedia.org/wiki/Dean_F._Sittig Dean F. Sittig, Ph.D.].
  
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[[Special:Listusers|We]] are currently working on [[Special:Statistics|{{NUMBEROFARTICLES}}]] articles, and we [[JFWiki:To Do|need your help]] to complete this study of Clinical Informatics. See [[Special:Statistics]] for more complete information on the site.
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The site can be browsed by anyone.  To begin a new article, or edit an existing article, you must first create an account and login to the ClinfoWiki.  The easiest way to create a new page is to edit an existing page where you want your article to link from, and then place your page's name within double square brackets, like so: <nowiki> [[Your page name here]] </nowiki> If you then save the page and click on that link, you will be taken to a screen with a box where you can begin to write your content.
  
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==Electronic Medical Record (EMR) Systems==
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[[Special:ActiveUsers|We]] are currently working on [[Special:Statistics|{{NUMBEROFARTICLES}}]] articles, and we '''[[Clinfowiki To Do|need your help]]''' to complete this study of Informatics. See [[Special:Statistics]] for more complete information on the site.
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see [[EMR]]
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==Computer-based Provider Order Entry -- CPOE== see [[CPOE]]
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The Clinfowiki has recently been reorganized into the <u>20</u> categories below. When adding (or editing) content, please try to ensure the content traces back to one of these categories.
  
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==Clinical Decision Support -- CDS== see [[CDS]]
 
  
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==Personal Health Records -- PHRs== see [[PHR]]
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=[[:Category:Technologies | Technologies]]=
  
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==Core Competencies in Clinical Informatics==
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==[[:Category: EHR | Electronic Medical Record (EMR)]]==
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see [[Informatics Competencies]]
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* [[EHR | What is the Electronic Medical Record]]
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* [[EMR v. EHR]]
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* [[Interface Design of the EHR]]
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* [[EHR-enabled Research]]
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* [[Security of the distributed electronic patient record: a case-based approach to identifying policy issues]]
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* [[Purpose of EMRs]]
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* [[Registries]]
  
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==Blueprint for a Comprehensive HIT System==
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==[[:Category: CPOE | Computerized Physician Order Entry (CPOE)]]==
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* [[CPOE | Computerized Physician Order Entry]]
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* [[Barcode medication administration]]
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* [[E-prescribing | Electronic Prescribing (E-prescribing)]]
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* [[Medication Errors]]
  
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*[http://wellness.wikispaces.com/Tactic+-+Use+Evolving+Health+Information+Technology+Tools Introducing new categories of HIT tools, which compliment the ones above]
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==[[:Category: CDS | Clinical Decision Support (CDS)]]==
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*[http://wellness.wikispaces.com/Blueprint+for+an+Integrated+HIT+system+-+The+Patient+Life-Cycle+Wellness+System Blueprint for an Integrated HIT system]
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* [[CDS | Clinical Decision Support]]
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* [[Timeline of the Development of Clinical Decision Support]]
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* [[The Evolution of Clinical Decision Support]]
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* [[Decision Support Service]]
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* [[Effect of Computerized Clinical Decision Support on the Use and Yield of CT Pulmonary Angiography in the Emergency Department]]
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* [[Automated Clinical Decision Support (CDS) using Pattern Recognition/Temporal Relationships]]
  
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==Biobanking -- a.k.a. Biorepositories or Tissue Banks == see [[BioBanking]]
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==[[:Category: PHR | Personal Health Record (PHR)]]==
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* [[PHR | Personal Health Records]]
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* [[PHA | Personal Health Applications]]
  
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National Cancer Institute Biobanking/Biorepositories
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==[[:Category: Reviews | Reviews of scientific papers]]==
  
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The National Cancer Institute’s pilot program to establish a multi-center, yet standardized,  biorepository of cancer specimens began with the prostate cancer Biorepository Coordination System (BCS).(1) This was a planned eleven institution physical and informational network linking individual institutional repositories of prostate cancer specimens into a giant, integrated resource with aims to improve research into prostate cancer biomarkers. The program was meant to be initiated in two stages, with progress reviews of the first stage occurring in January and April of 2006. (2) Unfortunately, the project was felt to not be cost effective and was subsequently abandoned.
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==[[:Category:Integrated Data Repositories (IDR) | Integrated Data Repositories (IDR)]]==
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* [[CIDR | Clinical Integrated Data Repositories (CIDR)]]
  
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One survivor of the BCS project is the cancer Biomedical Informatics Grid (caBIG). caBIG is both a network of over 80 collaborating organizations (including 50 National Cancer Institute-designated  as well as a collection of freely-available web-based software packages, including software to gather and process laboratory results including blood tests, micro-array data, and single nucleotide polymorphism data. (3)
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==[[:Category:Ancillary Systems | Ancillary Systems]]==
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* [[Ancillary Clinical Information Systems]]
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* [[BioBanking | Biobanking -- a.k.a. Biorepositories or Tissue Bank]]
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* [[Anesthesia Information Management Systems (AIMS)]]
  
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Current National Cancer Institute biorepository efforts have resulted in two ongoing research projects. The Cancer Genome Atlas is a project to characterize the messenger RNA signatures of different tumors (4), while the Clinical Proteonomic Technologies Initiative is a corollary effort on characterizing the protein expression signature of tumors (5).
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==[[:Category:Medical Devices | Medical Devices]]==
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<DynamicPageList>
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category = Medical Devices
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</DynamicPageList>
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* [[mHealth]]
  
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These National Cancer Institute biorepository efforts have not only included “wet bench” projects and informatics programs, but also the development of ethical guidelines and patient protection statements. Foremost among these statements is the First-Generation Guidelines for NCI-Supported Biorepositories. (6)
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==[[:Information Retrieval]]==
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* [[Semantic MEDLINE]]
  
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==[[:Category:Other Technologies | Other Technologies]]==
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* [[:Category:New_Technology| New CIS-related Technologies]]
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* [[FOSSM | Free and Open Source Software (FOSS) licensing in medicine]]
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* [[Unintended Consequences of HIT]]
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* [[i2b2 Informatics for Integrating Biology and the Bedside]]
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*  [[The Cloud and it's impact on Health IT]]
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* [[Teleconcussion - An Emerging Sports Concussion Management Model]]
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* [[The Blockchain in Healthcare]]
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* [[Robot Anesthesia]]
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* [[American College of Emergency Physicians:  InnovatED]]
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* [[Software-Guided insulin therapy]]
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* [[L1000 assay and the Connectivity Map dataset]]
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* [[5G and Healthcare]]
  
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(1) NIH press release, November 7, 2005 < www.nih.gov/news/pr/nov2005/nci-07c.htm>
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=[[:Category:Applications | Applications]]=
  
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(2) http://biospecimens.cancer.gov/resources/faqs.asp
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==[[:Category:Evidence Based Medicine (EBM) | Evidence Based Medicine (EBM)]]==
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* [[EBM | Evidence Based Medicine]]
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* [[Hierarchy of Evidence]]
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*  Rationale, design,and implementation protocol of an electronic health record integrated clinical prediction rule (iCPR) randomized trial in primary care
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* [[Efficacy of an Evidence-Based Clinical Decision Support in Primary Care Practices A Randomized Clinical Trial]]
  
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(3) https://cabig.nci.nih.gov/participants
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==[[:Category:Methodologies and Frameworks | Methodologies and Frameworks]]==
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* [[Evaluation and Design Methodologies]]
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* [[EHR Data Quality]]
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* [[The Journey through Grief: Insights from a Qualitative Study of Electronic Health Record Implementation]]
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* [[Sociotechnical systems]]
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* [[Data Center Planning and Design Overview for Healthcare Organizations]]
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* [[EHR Participatory Deployment Vs Black box Deployment methods]]
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* [[Real-time automatic polyp detection system for colonoscopy using artificial intelligence]]
  
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(4) http://cancergenome.nih.gov/index.asp
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==[[:Category:Government, Public and Private Initiatives | Government, Public and Private Initiatives]]==
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* [[HITREC | Health Information Technology Regional Extension Centers (HITREC)]]
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* [[RHIO | Regional Health Information Organization (RHIO)]]
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* [[NHIN | Nationwide Health Information Network (NwHIN)]]
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* [[Assistant Secretary for Planning & Evaluation]]
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* [[Office of the National Coordinator for Health Information Technology (ONC)]]
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* [[Trusted Exchange Framework and Common Agreement (TEFCA)]]
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* [[Council on the Application of Health Information Technology (CAHIT)]]
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* [[Agency for Healthcare Research and Quality (AHRQ)]]
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* [[Centers for Medicare and Medicaid Services (CMS)]]
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* [[U.S. Food and Drug Administration (FDA)]]
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* [[National Institutes of Health (NIH)]]
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* [[Big Data to Knowledge (BD2K)]]
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* [[Indian Health Service (IHS)]]
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* [[Health Services and Resource Administration (HRSA)]]
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* [[Centers for Disease Control and Prevention (CDC)]]
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* [[U.S. Department of Commerce]]
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* [[Combined U.S. Department of Defense / Veterans Affairs Initiatives]]
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* [[U.S. Department of Defense (DoD) Initiatives]]
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* [[Department of Veterans Affairs Initiatives]]
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* [[U.S. Department of Homeland Security]]
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* [[Healthcare Information Technology Standards Panel (HITSP)]]
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* [[Purpose and overview | International perspectives]]
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* [[UK]]
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* [[National Electronic Health Record Program in United Kingdom]]
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* [[:Category:Blogposium|All articles resulting from the Blogposium collaboration]]
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* [[Maternal and Perinatal Quality Care Collaboratives]]
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* [[EHealth Initiative]]
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* [[Meaningful use]]
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* [[Electronic Laboratory Reporting]]
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* [[Department of Education]]
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* [[PMI | Precision Medicine Initiative (PMI)]]
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* [[Health Information and Management Systems Society (HIMSS)]]
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* [[Society for Participatory Medicine]]
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* [[Veteran’s Affairs Switch from VistA based Electronic Health Record to Cerner Millennium]]
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* [[Singapore NEHR]]
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* [[ORCATECH | Oregon Center for Aging and Technology (ORCATECH)]]
  
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(5) http://proteomics.cancer.gov/
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==[[:Category:Training and User Support | Training and User Support]]==
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* [[Learning Health Systems (LHS)]]
  
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(6) http://biospecimens.cancer.gov/
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==[[:Category:Terminology and Coding | Terminology and Coding]]==
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*  [[Glossary of acronyms]]
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*  [[Definition and Use of Interface Terminologies]]
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*  [[Common Terminology Services | Common Terminology Services (CTS)]]
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*  [[Distributed Cognition and Knowledge-based Controlled Medical Terminologies]]
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*  [[Ontology]]
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*  [[International Statistical Classification of Diseases | International Statistical Classification of Diseases (ICD)]]
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*  [[Systematized Nomenclature Of Medicine | Systematized Nomenclature Of Medicine (SNOMED)]]
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*  [[International Dietetics and Nutrition Terminology | International Dietetics and Nutrition Terminology (IDNT)]]
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*  [[International Classification of Primary Care | International Classification of Primary Care (ICPC)]]
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*  [[Unified Medical Language System | Unified Medical Language System (UMLS)]]
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*  [[Aggregated data]]
  
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==Regional Health Information Organizations -- RHIOs== see [[RHIO]]
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==[[:Category:Workflow | Workflow]]==
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* [[Methods to capture workflow]]
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* [[Measurement]]
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* [[Importance of Workflow Analysis During Physician Office EMR Implementation]]
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* [[Workflow Management System]]
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* [[Process Mining]]
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* [[Using Evidence-Based Layout Design to Enhance Workflow in the Clinical Laboratory]]
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* [[Planning for Radiology CDS Technology]]
  
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==Evidence-Based Medicine -- EBM== see [[EBM]]
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==[[:Category:Interface, Usability and Accessibility | Interface, Usability and Accessibility]]==
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*  [[Usability]]
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* [[Enhancing patient safety and quality of care by improving the usability of electronic health record systems: recommendations from AMIA]]
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*  [[Software Test Documentation]]
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* [[Data Model to Enhance the Security and Privacy of Healthcare Data]]
  
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==U.S. Federal Health Information Technology Initiatives==
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==[[:Category:Data Visualization | Data Visualization]]==
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*'''[[Assistant Secretary for Planning &amp; Evaluation]]'''
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* [[Clinically Relevant Data Visualization]]
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*'''[[Office of the National Coordinator for Health Information Technology (ONC)]]'''
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*'''[[Council on the Application of Health Information Technology (CAHIT)]]'''
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*'''[[Agency for Healthcare Research and Quality (AHRQ)]]'''
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*'''[[Centers for Medicare and Medicaid Services (CMS)]]'''
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*'''[[U.S. Food and Drug Administration (FDA)]]'''
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*'''[[National Institutes of Health (NIH)]]'''
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*'''[[Indian Health Service (IHS)]]'''
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*'''[[Health Services and Resource Administration (HRSA)]]'''
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*'''[[Centers for Disease Control and Prevention (CDC)]]'''
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*'''[[U.S. Department of Commerce]]'''
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*'''[[Combined U.S. Department of Defense / Veterans Affairs Initiatives]]'''
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*'''[[U.S. Department of Defense (DoD) Initiatives]]'''
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*'''[[Department of Veterans Affairs Initiatives]]'''
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*'''[[U.S. Department of Homeland Security]]'''
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==The E-Patient-Provider Relationship==
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=[[:Category:Reference | Reference]]=
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*'''[[SMS, Blogs and the Patient-Provider Relationship: Enhancing Communication, Improving Treatment Outcomes]]'''
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==Interface Terminology==
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==[[:Category:Academics and Education | Academics and Education]]==
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* '''[[Definition and Use of Interface Terminologies]]'''
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* [[Informatics Students' Contributions|Contributions from OHSU students]]
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* [[List of Informatics Departments]]
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* [[Endowed Professorships | Endowed Professorships and Chairs in Health / Medical / Nursing / Biomedical Informatics]]
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* [[Graduate Medical Education Milestones]]
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* [[List of Clinical Informatics Conferences]]
  
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==International views==
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==[[:Category:Specialties and Disciplines | Specialties and Disciplines]]==
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* '''[[Purpose and overview]]'''
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* [[Bioinformatics]]
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* '''[[UK]]'''
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* [[Chief Nursing Informatics Officer]]
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* [[Clinical Informatics Fellowship]]
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* [[Clinical research informatics]]
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* [[Clinical Social Work Informatics]]
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* [[Cognitive Informatics]]
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* [[Consumer health informatics]]
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* [[Dental informatics]]
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* [[Health informatics]]
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* [[Imaging informatics]]
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* [[Medical laboratory informatics]]
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* [[Medical Subspecialty Board of Clinical Informatics]]
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* [[Mental health informatics]]
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* [[Neuroinformatics]]
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* [[Nursing informatics]]
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* [[Pediatric Informatics]]
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* [[Pharmacy Informatics]]
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* [[Public Health Informatics]]
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* [[Quality Informatics]]
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* [[Traditional Chinese Medicine (TCM) informatics]]
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* [[Translational Bioinformatics]]
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* [[Ethics in Informatics]]
  
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==Blogposium, April 2006==
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==[[:Category:Research Groups | Research Groups]]==
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* [[CIRCLE: Clinical Informatics Research Collaborative]]
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* [[Biomedical Informatics Research Network (BIRN)]]
  
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The Blogposium, held from April 18-20, was an innovation in collaborative blogging and wiki building.
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==[[:Category:Literature | Literature]]==
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* [[Books | Books on Topics in Clinical Informatics]]
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* [[Leading Health Informatics and Medical Informatics Journals]]
  
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The effort marshalled the expertise and energy of several dozen health bloggers and volunteers to expand and refine this Clinical Informatics Wiki. Bloggers posted their first drafts of entries as posts or links to this wiki and invited readers to provide comments and edit suggestions.
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==[[:Category:External Links | External Links]]==
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* [http://www.ohsu.edu/xd/ Oregon Health & Science University]
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*[[:Category:Blogposium|All articles resulting from the BlogPosium collaboration]]'''
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* [http://www.ohsu.edu/xd/education/schools/school-of-medicine/departments/clinical-departments/dmice/ The Department of Medical Informatics and Clinical Epidemiology at OHSU]
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* [http://www.cpoe.org Website of the Provider Order Entry Team from Oregon Health]
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While many bloggers and readers contributed to this Web 2.0 innovation in collaborative work, key participants included the follow blogs. Please visit them and thank them for their contributions:
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* [http://hittransition.com/tools.htm Links to online tools for HIT/RHIO development]
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* [http://www.hitdashboard.com/unitedStates.aspx Health Information Technology Dashboard]
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* [http://thielst.typepad.com/my_weblog/Christina's Considerations] on Regional Health Information Organizations
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* [http://wellness.wikispaces.com/Tactic+-+Use+Evolving+Health+Information+Technology+Tools Wellness Wiki: Use Evolving Health Information Technology Tools]
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* [http://www.conmergence.com/ Conmergence] on Telehealth
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* [http://www.emedicine.com/ eMedicine] Physician contributed medical articles and CME
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* [http://www.drugwonks.com/ Drugwonks] on FDA Critical Path Initiative
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* [http://www.kmle.com KMLE Medical Dictionary] Medical dictionary and medical related links
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* [http://www.bloglines.com/blog/eHealth eHealth] on Integration of Personal Health Records and Electronic Medical Records
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* [http://www.merckmedicus.com Merck Medicus] Contains a significant number of textbook resources (requires free registration
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* [http://www.emrandhipaa.com/ EMR and HIPAA] on Electronic Medical Records and Biometric Integration
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* [http://www.nlm.nih.gov NLM] (US National Library of Medicine)
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* [http://fardj.prblogs.org/ Envisioning 2.0] on The E-Patient-Provider Relationship
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* [http://www.webmd.com WebMD] General comprehensive online health information
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* [http://www. healthnex.org HealthNex] (two other topics: Biobanking and Genetic Privacy Issues
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* [http://www.open.medicdrive.org Medicine 2.0] Comprehensive online Personal health record information.
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* [http://www.hitsmit.com/ HITsmit] on e-MAR Systems
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* [http://www.searchmedica.com SearchMedica.com] Searches medical literature for health care professionals
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* [http://blog.hittransition.com/ HIT Transition] on RHIO Startup Funding and Finance
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* [http://www.ahima.org AHIMA] American Health Information Management Association
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* [http://www.rodspace.co.uk/blog/blogger.html Informaticopia] on International Perspectives on Clinical Informatics
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* [http://www.amia.org AMIA] American Medical Informatics Association
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* [http://marketplace.md/community/blogs/marketplace.md_blog/default.aspx Marketplace.MD] on the Consumer-Driven Health Care Movement
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* [http://www.ania-caring.org ANIA-CARING] American Nursing Informatics Association and the Capital Area Roundtable on Informatics in NursinG
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* [http://medicalconnectivity.com/ Medical Connectivity] on Integrating Medical Devices into EMRs
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* [http://www.himss.org HIMSS] Healthcare Information and Management Systems
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* [http://www.enochchoi.com/thoughts/ medmusings] on Mobile Access to EMR/EHR/PHR for Providers and Patients
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* [http://www.imia-medinfo.org IMIA] International Medical Informatics Association
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* [http://usemed.com/ Usemed] on Ongoing and Completed EHR, CPOE and CDS Implementation Projects
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* [http://wellness.wikispaces.com/Tactic+-+Use+Evolving+Health+Information+Technology+Tools Use Evolving Health Information Technology Tools]
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* [http://wellness.wikispaces.com/ WellnessWiki] an ever-evolving virtual encyclopedia of the healthcare crisis and potential remedies
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* [http://wellness.wikispaces.com/Blueprint+for+an+Integrated+HIT+system+-+The+Patient+Life-Cycle+Wellness+System Blueprint for an Integrated HIT system - The Patient Life-Cycle Wellness System]
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* [http://circleinformatics.org CIRCLE: Clinical Informatics Research Collaborative]
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==Reviews of Recent articles on Clinical Informatics==
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−
See [[Reviews]]
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==Endowed Professorships and Chairs in Health / Medical / Nursing / Biomedical Informatics==
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see [[Endowed Professorships]]
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−
 
+
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==External Links==
+
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*[http://www.cpoe.org Website of the Provider Order Entry Team from Oregon Health]
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*[http://hittransition.com/tools.htm Links to online tools for HIT/RHIO development]
+
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*[http://www.hitdashboard.com/unitedStates.aspx Health Information Technology Dashboard]
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*[http://wellness.wikispaces.com/Tactic+-+Use+Evolving+Health+Information+Technology+Tools Wellness Wiki: Use Evolving Health Information Technology Tools]
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Latest revision as of 13:46, 26 April 2022

Welcome to the OHSU Clinfowiki

The OHSU Clinical Informatics Wiki (aka ClinfoWiki) is the implementation of a wiki website devoted to topics in Biomedical Informatics.

The Department of Medical Informatics & Clinical Epidemiology (DMICE) is one of 27 academic departments in the School of Medicine at Oregon Health & Science University (OHSU). The mission of DMICE is to provide leadership, discovery and dissemination of knowledge in clinical informatics, clinical epidemiology, and bioinformatics / computation biology. This mission is fulfilled through programs of research, education, and service. DMICE programs are recognized internationally for their accomplishment and innovation. The OHSU Biomedical Informatics program is one of the largest of its kind in the world.

Clinfowiki is edited by Vishnu Mohan, M.D., M.B.I., and was created in 2005 by Dean F. Sittig, Ph.D..

The site can be browsed by anyone. To begin a new article, or edit an existing article, you must first create an account and login to the ClinfoWiki. The easiest way to create a new page is to edit an existing page where you want your article to link from, and then place your page's name within double square brackets, like so: [[Your page name here]] If you then save the page and click on that link, you will be taken to a screen with a box where you can begin to write your content.

We are currently working on 1,583 articles, and we need your help to complete this study of Informatics. See Special:Statistics for more complete information on the site.

The Clinfowiki has recently been reorganized into the 20 categories below. When adding (or editing) content, please try to ensure the content traces back to one of these categories.


Technologies

Electronic Medical Record (EMR)

Computerized Physician Order Entry (CPOE)

Clinical Decision Support (CDS)

Personal Health Record (PHR)

Reviews of scientific papers

Integrated Data Repositories (IDR)

Ancillary Systems

Medical Devices

Information Retrieval

Other Technologies

Applications

Evidence Based Medicine (EBM)

Methodologies and Frameworks

Government, Public and Private Initiatives

Training and User Support

Terminology and Coding

Workflow

Interface, Usability and Accessibility

Data Visualization

Reference

Academics and Education

Specialties and Disciplines

Research Groups

Literature

External Links

Retrieved from "https://clinfowiki.org/wiki/index.php?title=Main_Page&oldid=33213"